Blast output options 123


Blast output options 123


Introduction LicenseAnnie is released under the MIT License. Why would you want to create a 3 column table of annotations. To add opptions annotations to a genome using the Genome Annotation Optiobs (GAG) or a transcriptome using Transvestigator of blast output options 123. InstallationAnnie is written in Python 3. By martin on January 1, 2015 in Not just Python IntroductionSurprisingly, given that this is a website about otuput, this article is going to be about how to avoid programming.

Herewe present our contribution into highthroughput analysis of results BLASTsearches. opions The output of the program isa detailed annotation of the repeats that are present in the querysequence as well as a blast output options 123 version of the query sequence in whichall the annotated repeats have been masked (default: replaced byNs). On average, almost 50% of a human genomic DNA sequence currentlywill be masked by the program. The BLAST search will apply only to theresidues in the range.

Sequence coordinates are from 1to the sequence length.The range includes the residue atthe To coordinate.more. Query subrangeFromQuery subrangeToOr, upload file. Use the browse button to upload a file from your local disk.The file may contain a optiins sequence or a list of sequences.The data may be either a list of database accession numbers,NCBI gi numbers, or sequences in FASTA format.

Enter one or more queries in the top text box and one or more subject sequences in the lower text box.Then use the BLAST button at the bottom of the page to align your sequences.To get the CDS annotation in the output, use oufput the NCBI accession orgi number for either the query or subject. Subject sequence(s) to be.




Blast output options 123

Blast output options 123

Blast output options 123



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